Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs12144445 | chr1:89465238 | C/T | 2.69E-5 | 206 | 17 | 15.9 | 10.23 | KM Plot |
| KIRP | rs12146148 | chr1:89471892 | C/T | 6.89E-5 | 207 | 17.07 | 15.9 | 10.23 | KM Plot |
| KIRP | rs12148791 | chr15:24511180 | G/C | 4.13E-5 | 208 | 17.03 | 14.8 | 10.23 | KM Plot |
| KIRP | rs12149921 | chr16:19843544 | C/A | 8.96E-5 | 206 | 14.87 | 18.93 | 18 | KM Plot |
| KIRP | rs12173854 | chr6:26371679 | A/G | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs12174602 | chr6:26372827 | C/T | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs12174623 | chr6:26373086 | C/T | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs12174631 | chr6:26373150 | C/T | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs12174639 | chr6:26373121 | G/A | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs12176317 | chr6:26372786 | A/G | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs12207623 | chr6:71920912 | G/A | 0 | 213 | 14.53 | 20.53 | 4.07 | KM Plot |
| KIRP | rs12216009 | chr6:110798491 | A/G | 8.93E-6 | 207 | 8.22 | 13.3 | 18.87 | KM Plot |
| KIRP | rs12217245 | chr10:75576483 | T/C | 0 | 214 | 16.53 | 14.83 | 2.47 | KM Plot |
| KIRP | rs12220394 | chr10:75576405 | G/C | 0 | 214 | 16.53 | 14.83 | 2.47 | KM Plot |
| KIRP | rs12220939 | chr10:91085368 | G/T | 3.31E-6 | 202 | 17 | 16.93 | 6.92 | KM Plot |